MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Lactobacillus murinus LAC.1

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NCBI Genome Annotation:

contigs: 225

bases: 2,084,440 bps

CDS: 2,121

rRNA: 22

tRNA: 62

tmRNA: 1

Total number of protein coding genes annotated/found: 2,050

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA)	Range ^	Gene Product Name
SEQF5005\|JADGKI010000213.1	MBF0702326.1	NA AA	100/33	7720-7819	IS30 family transposase
SEQF5005\|JADGKI010000048.1	MBF0700797.1	NA AA	101/33	27657-27757	CPBP family intramembrane metalloprotease
SEQF5005\|JADGKI010000079.1	MBF0701246.1	NA AA	101/33	153-253	CPBP family intramembrane metalloprotease
SEQF5005\|JADGKI010000046.1	MBF0700756.1	NA AA	105/35	8904-9008	hypothetical protein
SEQF5005\|JADGKI010000212.1	MBF0702322.1	NA AA	105/35	1-106	IS30 family transposase
SEQF5005\|JADGKI010000055.1	MBF0700894.1	NA AA	109/36	109-1	transcriptional regulator
SEQF5005\|JADGKI010000113.1	MBF0701784.1	NA AA	114/38	20524-20637	50S ribosomal protein L36
SEQF5005\|JADGKI010000101.1	MBF0701626.1	NA AA	117/39	76818-76934	DUF4044 domain-containing protein
SEQF5005\|JADGKI010000121.1	MBF0701864.1	NA AA	117/39	1351-1235	IS3 family transposase
SEQF5005\|JADGKI010000208.1	MBF0702318.1	NA AA	119/39	135-253	helix-turn-helix domain-containing protein
SEQF5005\|JADGKI010000025.1	MBF0700523.1	NA AA	124/41	124-1	helix-turn-helix domain-containing protein
SEQF5005\|JADGKI010000223.1	MBF0702376.1	NA AA	124/41	124-1	helix-turn-helix domain-containing protein
SEQF5005\|JADGKI010000122.1	MBF0701888.1	NA AA	126/42	23996-23871	transposase
SEQF5005\|JADGKI010000189.1	MBF0702265.1	NA AA	129/43	1-131	IS3 family transposase
SEQF5005\|JADGKI010000138.1	MBF0702036.1	NA AA	130/43	130-1	IS110 family transposase
SEQF5005\|JADGKI010000146.1	MBF0702086.1	NA AA	130/43	1523-1652	IS110 family transposase
SEQF5005\|JADGKI010000042.1	MBF0700743.1	NA AA	132/44	21901-22032	ComC/BlpC family leader-containing pheromone/bacteriocin
SEQF5005\|JADGKI010000042.1	MBF0700728.1	NA AA	135/45	7122-6988	50S ribosomal protein L34
SEQF5005\|JADGKI010000008.1	MBF0700375.1	NA AA	138/46	3771-3634	hypothetical protein
SEQF5005\|JADGKI010000058.1	MBF0700953.1	NA AA	138/46	34125-34262	hypothetical protein

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Page last updated: July 7, 2021 08:39:35